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2021
1. J.A. Duke, A.V. Paschall, L.S. Robinson, C.J. Knoot, E. Vinogradov, N.E. Scott, M.F. Feldman, F. Y. Avci, C.M. Harding. Development and Immunogenicity of a Prototype Multivalent Group B Streptococcus Bioconjugate Vaccine. ACS Infect Dis. (2021) doi: 10.1021/acsinfecdis.1c00415. PMID: 34633812
2. P.D. Veith, N.E Scott, E.C. Reynolds. Characterization of the O-Glycoproteome of Tannerella forsythia. mSphere (2021) e0064921. PMID: 34523981
3. A.J. Hayes, J.M. Lewis, M.R. Davies, N.E. Scott*. Burkholderia PglL enzymes are Serine preferring oligosaccharyltransferases which target conserved proteins across the Burkholderia genus. Commun Biol 4, 1045 (2021). PMID: 34493791 *Corresponding authorship
2. P.D. Veith, N.E Scott, E.C. Reynolds. Characterization of the O-Glycoproteome of Tannerella forsythia. mSphere (2021) e0064921. PMID: 34523981
3. A.J. Hayes, J.M. Lewis, M.R. Davies, N.E. Scott*. Burkholderia PglL enzymes are Serine preferring oligosaccharyltransferases which target conserved proteins across the Burkholderia genus. Commun Biol 4, 1045 (2021). PMID: 34493791 *Corresponding authorship
4. G. Sycz, G. Di Venanzio, M.G. Sartorio, L. Nguyen-Hung, N.E. Scott, W.L. Beatty, M.F. Feldman. Modern Acinetobacter baumannii clinical isolates replicate inside spacious vacuoles and egress from macrophages. PLOS pathogens (2021) 17(8):e1009802. PMID: 34370792
5. R. Mao, S. Xi, S. Shah, M.J. Roy, A. John, J.P. Lingford, G. Gäde, N.E. Scott, E.D. Goddard-Borger. Synthesis of C-Mannosylated Glycopeptides Enabled by Ni-Catalyzed Photoreductive Cross-Coupling Reactions. J Am Chem Soc. (2021)
6. R. Grinter, F.C. Morris, R.A. Dunstan, P.M. Leung, A. Kropp, M. Belousoff, S.D. Gunasinghe, N.E. Scott, S. Beckham, A.Y. Peleg, C. Greening, J. Li, E. Heinz, T. Lithgow. BonA from Acinetobacter baumannii forms a divisomelocalized decamer that supports outer envelope function. mBio (2021) 12:e01480-21.
7. M.A. Skinnider, N.E. Scott*, A. Prudova, Craig H. Kerr, N. Stoynov, R.G. Stacey, Q.W.T. Chan, D. Rattray, J. Gsponer and L.J. Foster. An atlas of protein-protein interactions across mouse tissues. Cell (2021) DOI:https://doi.org/10.1016/j.cell.2021.06.003 *Joint lead author
8. C. Giogha*, N.E Scott,* T. Wong Fok Lung, G.L Pollock, M. Harper, E.D Goddard-Borger, J.S. Pearson and E.L. Hartland. NleB2 from enteropathogenic Escherichia coli is a novel arginine-glucose transferase effector. PLoS Pathogen (2021) 17(6):e1009658. *Joint lead author
9. P. Pymm, A. Adair, L.J. Chan, J.P. Cooney, F.L. Mordant, C.C. Allison, E. Lopez, E.R. Haycroft, M.T. O'Neill, L.L. Tan, M.H. Dietrich, D. Drew, M. Doerflinger, M.A. Dengler, N.E. Scott, A.K. Wheatley, N.A. Gherardin, H. Venugopal, D. Cromer, M.P. Davenport, R. Pickering, D.I. Godfrey, D.F.J. Purcell, S.J. Kent, A.W. Chung, K. Subbarao, M. Pellegrini, A. Glukhova, W.H. Tham. Nanobody cocktails potently neutralize SARS-CoV-2 D614G N501Y variant and protect mice. Proc Natl Acad Sci U S A. (2021), 118(19):e2101918118.
10. D.R. Thomas and N.E. Scott. Glycoproteomics: growing up fast. Current Opinion in Structural Biology (2021) 68, pp. 18–25
11. N.E. Scott and L.E. Edgington-Mitchell. Editorial overview: Systems biology and the rise and rise of omics approaches. (2021) Current Opinion in Chemical Biology. PMID: 33419639
12. S. El Qaidi, N.E. Scott and P.R. Hardwidge. Arginine glycosylation enhances methylglyoxal detoxification. Scientific Reports. (2021) 11(1):3834. PMID: 33589708
13. A. John, M.A. Järvå, S. Shah, R. Mao, S Chappaz, R.W. Birkinshaw, P.E. Czabotar, A.W. Lo, N.E. Scott and E.D. Goddard-Borger. Yeast- and antibody-based tools for studying tryptophan C-mannosylation. Nature Chemical Biology. (2021) doi: 10.1038/s41589-020-00727-w. PMID: 33542533
10. D.R. Thomas and N.E. Scott. Glycoproteomics: growing up fast. Current Opinion in Structural Biology (2021) 68, pp. 18–25
11. N.E. Scott and L.E. Edgington-Mitchell. Editorial overview: Systems biology and the rise and rise of omics approaches. (2021) Current Opinion in Chemical Biology. PMID: 33419639
12. S. El Qaidi, N.E. Scott and P.R. Hardwidge. Arginine glycosylation enhances methylglyoxal detoxification. Scientific Reports. (2021) 11(1):3834. PMID: 33589708
13. A. John, M.A. Järvå, S. Shah, R. Mao, S Chappaz, R.W. Birkinshaw, P.E. Czabotar, A.W. Lo, N.E. Scott and E.D. Goddard-Borger. Yeast- and antibody-based tools for studying tryptophan C-mannosylation. Nature Chemical Biology. (2021) doi: 10.1038/s41589-020-00727-w. PMID: 33542533
14. G. Wang, L. Glaser, N.E. Scott, Y.F. Mohamed, R. Ingram, K. Laroucau and M.A. Valvano. A glycoengineered antigen exploiting a conserved protein O-glycosylation pathway in the Burkholderia genus for detection of glanders infections. Virulence. (2021) 12(1):493-506. PMID: 33509023
15. C.J. Kearney, S.J. Vervoort, K.M. Ramsbottom, I Todorovski, E.J. Lelliott, M. Zethoven, L. Pijpers, B.P. Martin, T. Semple, L. Martelotto, J.A. Trapani, I.A. Parish, N.E. Scott, J. Oliaro and R.W. Johnstone. SUGAR-seq enables simultaneous detection of glycans, epitopes, and the transcriptome in single cells. Science Advances (2021) 19;7(8):eabe3610. PMID: 33608275
16. G. Deliyannis, C.Y. Wong, H.A. McQuilten, A. Bachem, M.V. Clarke, X. Jia, K. Horrocks, W. Zeng, J. Girkin, N.E. Scott, S.L. Londrigan, P.C. Reading, N.W. Bartlett, K. Kedzierska, L.E. Brown, F.A. Mercuri, C. Demaison, D.C. Jackson and B.Y. Chua. TLR-2-mediated activation of innate responses in the upper airways confers anti-viral protection of the lungs. JCI Insight. (2021) 9:140267. doi: 10.1172/jci.insight.140267. PMID: 33561017
17. A. R. Ahmad Izaham C.S. Ang, S. Nie, L.E. Bird, N.A. Williamson and N. E. Scott. What are we missing by using hydrophilic enrichment? Improving bacterial glycoproteome coverage using total proteome and FAIMS analysis. J Proteome Res. (2021) 20(1):599-612 PMID: 33125241.
15. C.J. Kearney, S.J. Vervoort, K.M. Ramsbottom, I Todorovski, E.J. Lelliott, M. Zethoven, L. Pijpers, B.P. Martin, T. Semple, L. Martelotto, J.A. Trapani, I.A. Parish, N.E. Scott, J. Oliaro and R.W. Johnstone. SUGAR-seq enables simultaneous detection of glycans, epitopes, and the transcriptome in single cells. Science Advances (2021) 19;7(8):eabe3610. PMID: 33608275
16. G. Deliyannis, C.Y. Wong, H.A. McQuilten, A. Bachem, M.V. Clarke, X. Jia, K. Horrocks, W. Zeng, J. Girkin, N.E. Scott, S.L. Londrigan, P.C. Reading, N.W. Bartlett, K. Kedzierska, L.E. Brown, F.A. Mercuri, C. Demaison, D.C. Jackson and B.Y. Chua. TLR-2-mediated activation of innate responses in the upper airways confers anti-viral protection of the lungs. JCI Insight. (2021) 9:140267. doi: 10.1172/jci.insight.140267. PMID: 33561017
17. A. R. Ahmad Izaham C.S. Ang, S. Nie, L.E. Bird, N.A. Williamson and N. E. Scott. What are we missing by using hydrophilic enrichment? Improving bacterial glycoproteome coverage using total proteome and FAIMS analysis. J Proteome Res. (2021) 20(1):599-612 PMID: 33125241.
2020
18. L.F. Fielden, N.E. Scott, C.S. Palmer, C.A. Khoo, H.J. Newton, D. Stojanovski. Proteomic identification of Coxiella burnetii effector proteins targeted to the host cell mitochondria during infection. Mol Cell Proteomics. (2020) mcp.RA120.002370. PMID: 33177156
19. M.F. Haurat, N.E. Scott, G. Di Venanzio, J. Lopez, B. Pluvinage, A.B. Boraston, M.J. Ferracane, M.F. Feldman. The Glycoprotease CpaA Secreted by Medically Relevant Acinetobacter Species Targets Multiple O-Linked Host Glycoproteins. mBio. (2020) 11(5). pii: e02033-20. PMID: 33024038
20. J. Gan, N.E. Scott, J.P.M. Newson, R.R. Wibawa, T. Wong Fok Lung, G.L. Pollock, G.Z. Ng, I. van Driel, J.S. Pearson, E.L. Hartland, C. Giogha. The Salmonella Effector SseK3 Targets Small Rab GTPases. Front Cell Infect Microbiol. (2020) 10:419 PMID: 32974215
21. J.A Juno, H.- Tan, W.S Lee, A. Reynaldi, H.G. Kelly, K. Wragg, R. Esterbauer, H.E. Kent, C.J. Batten, F.L. Mordant, N.A. Gherardin, P. Pymm, M.H. Dietrich, N.E. Scott, W.H. Tham, D.I. Godfrey, K. Subbarao, M.P. Davenport, S.J. Kent, A.K. Wheatley. Humoral and circulating follicular helper T cell responses in recovered patients with COVID-19. Nature Medicine. (2020) 26(9):1428-1434. PMID: 32661393
22. A. R. Ahmad Izaham, N. E. Scott. Open database searching enables the identification and comparison of bacterial glycoproteomes without defining glycan compositions prior to searching. Mol Cell Proteomics. (2020) PMID: 32576591.
19. M.F. Haurat, N.E. Scott, G. Di Venanzio, J. Lopez, B. Pluvinage, A.B. Boraston, M.J. Ferracane, M.F. Feldman. The Glycoprotease CpaA Secreted by Medically Relevant Acinetobacter Species Targets Multiple O-Linked Host Glycoproteins. mBio. (2020) 11(5). pii: e02033-20. PMID: 33024038
20. J. Gan, N.E. Scott, J.P.M. Newson, R.R. Wibawa, T. Wong Fok Lung, G.L. Pollock, G.Z. Ng, I. van Driel, J.S. Pearson, E.L. Hartland, C. Giogha. The Salmonella Effector SseK3 Targets Small Rab GTPases. Front Cell Infect Microbiol. (2020) 10:419 PMID: 32974215
21. J.A Juno, H.- Tan, W.S Lee, A. Reynaldi, H.G. Kelly, K. Wragg, R. Esterbauer, H.E. Kent, C.J. Batten, F.L. Mordant, N.A. Gherardin, P. Pymm, M.H. Dietrich, N.E. Scott, W.H. Tham, D.I. Godfrey, K. Subbarao, M.P. Davenport, S.J. Kent, A.K. Wheatley. Humoral and circulating follicular helper T cell responses in recovered patients with COVID-19. Nature Medicine. (2020) 26(9):1428-1434. PMID: 32661393
22. A. R. Ahmad Izaham, N. E. Scott. Open database searching enables the identification and comparison of bacterial glycoproteomes without defining glycan compositions prior to searching. Mol Cell Proteomics. (2020) PMID: 32576591.
23. J. Li, R. Epa, N.E. Scott, D. Skoneczny, M. Sharma, A.J.D. Snow, J.P. Lingford, E.D. Goddard-Borger, G.J. Davies, M.J. McConville, S.J. Williams. A sulfoglycolytic Entner-Doudoroff pathway in Rhizobium leguminosarum bv. trifolii SRDI565. Applied Environmental Microbiology. (2020) 86(15). pii: e00750-20 PMID: 32444469
24. J. Duma, H. Nothaft, D. Weaver, C. Fodor, B. Beadle, D. Linton, S. Benoit, N.E. Scott, R. Maier, C.M. Szymanski. Influence of protein glycosylation on Campylobacter fetus physiology. Frontiers in Microbiology. (2020) 11:1191. PMID: 32625174
25. M. Järvå, J.P. Lingford, A. John, N. Madiedo Soler N.E. Scott, E.D. Goddard-Borger. Trefoil factors share a lectin activity that defines their role in mucus. Nat Commun. (2020) 11, 2265
26. Z. Fan*, J.R. Devlin*, S. Hogg, M.A. Doyle, P.F. Harrison, I. Todorovski, L.A. Cluse, D. Knight, J. Sandow, G. Gregory, A. Fox, T.H. Beilharz, N. Kwiatkowski, N.E. Scott, A. Tufegdzic-Vidacovic, G. Kelly, J. Svejstrup, M. Geyer, N. Gray, S.J. Vervoort, R.W. Johnstone. CDK13 cooperates with CDK12 to control global RNA polymerase II processivity. Science Advances (2020) 6(18), eaaz5041
27. B. Padmanabhan, L.F. Fielden, A. Hachani, P. Newton, D.R. Thomas, H.J. Cho, C.A. Khoo, D. Stojanovski, C.R. Roy, N.E. Scott, H.J. Newton. Biogenesis of the spacious Coxiella-containing vacuole depends on host transcription factors TFEB and TFE3. Infect Immun. (2020) 20;88(3):e00534-19
28. S. El Qaidi, N.E. Scott, M.P. Hays, B.V. Geisbrecht, S. Watkins, P.R. Hardwidge. An intra-bacterial activity for a T3SS effector. Scientific Reports (2020), 10 (1), 1073
2019
29. C.C. Oppy, L. Jebeli, M. Kuba, C.V. Oates, R Strugnell, L.E. Edgington-Mitchell, M.A. Valvano, E.L. Hartland, H.J. Newton, N.E. Scott. Loss of O-Linked Protein Glycosylation in Burkholderia cenocepacia Impairs Biofilm Formation and Siderophore Activity and Alters Transcriptional Regulators. mSphere. (2019) Nov 13;4(6). pii: e00660-19
30. E. Lopez, N.E. Scott, B.D. Wines, P.M Hogarth, A. K. Wheatley, S. J. Kent and A.W. Chung. Low pH Exposure During Immunoglobulin G Purification Methods Results in Aggregates That Avidly Bind Fcγ Receptors: Implications for Measuring Fc Dependent Antibody Functions. Front Immunol. (2019). 10:2415
31. M.T Moutaoufik, R. Malty, S. Amin, Q. Zhang, S. Phanse, A. Gagarinova, M. Zilocchi, L. Hoell, Z. Minic, M. Gagarinova, H Aoki, J. Stockwell, M. Jessulat, F. Goebels, K. Broderick, N.E. Scott, J. Vlasblom, G. Musso, B. Prasad, E. Lamantea, B. Garavaglia, A. Rajput, K. Murayama, Y. Okazaki, L.J. Foster, G.D. Bader, F.S. Cayabyab, M. Babu. Rewiring of the Human Mitochondrial Interactome during Neuronal Reprogramming Reveals Regulators of the Respirasome and Neurogenesis. iScience. (2019) 19:1114-1132. PMID: 31536960
32. M.L Carlson, R.G. Stacey, J.W. Young, I.S. Wason, Z. Zhao, D.G. Rattray, N. Scott, C.H. Kerr, M. Babu, L.J. Foster, F. Duong Van Hoa. Profiling the Escherichia coli membrane protein interactome captured in Peptidisc libraries. Elife. (2019) Jul 31;8.
33. M.F Feldman, A.E. Mayer Bridwell, N.E. Scott, E. Vinogradov, S.R. McKee, S.M. Chavez, J. Twentyman, C.L. Stallings, D.A. Rosen, C.M. Harding. A promising bioconjugate vaccine against hypervirulent Klebsiella pneumoniae. Proc Natl Acad Sci U S A. (2019) 116(37):18655-18663
34. Y.F. Mohamed*, N.E. Scott*, A. Molinaro, C. Creuzenet, X Ortega, G. Lertmemongkolchai, M.M. Tunney, H. Green, A.M. Jones, D. DeShazer, B.J. Currie, L.J. Foster, R. Ingram, C. De Castro and M.A. Valvano. A general protein O-glycosylation machinery conserved in Burkholderia species improves bacterial fitness and elicits glycan immunogenicity in humans. J Biol Chem (2019) 294(36):13248-13268 *Joint lead author
35. N.M. Bzdyl, N.E. Scott, I.H. Norville, A.E. Scott, T.Atkins, S.Pang, D.S. Sarovich, G. Coombs, T.J.J. Inglis, C.M. Kahler and M. Sarkar-Tyson.. Peptidyl-prolyl isomerase, ppiB, is essential for proteome homeostasis and virulence in Burkholderia pseudomallei . Infect Immun. (2019) 87(10). pii: e00528-19.
36. N.E. Scott. Expanding our understanding of the role of microbial glycoproteomes through high-throughput mass spectrometry approaches. Glycoconj J. (2019) Jul 4
37. G Di Venanzio, A. L. Flores-Mireles, J.J. Calix, M.F. Haurat, N.E. Scott, L.D. Palmer, R.F. Potter, M.E. Hibbins, L. Friedman, B. Wang, G. Dantas, E.P. Skaar, S.J. Hultgren, M.F. Feldman. Urinary tract colonization is enhanced by an endogenous plasmid that regulates chromosomal genes in uropathogenic Acinetobacter baumannii. Nat Commun. (2019) 24;10(1):2763.
38. J. Newson*, N.E. Scott*, I.Y.W. Chung, T.W. Fok Lung, C. Giogha, N. Wang, R. Strugnell, N. Brown, M. Cygler, J. Pearson, E. Hartland. Salmonella effectors SseK1 and SseK3 target death domain proteins in the TNF and TRAIL signaling pathways. Mol. Cell Proteomics (2019) 18(6):1138-1156. *Joint lead author
39. C.M Harding, M.A. Nasr MA, N.E. Scott, G. Goyette-Desjardins, H. Nothaft, A.E. Mayer, S.M. Chavez, J.P Huynh, R.L Kinsella, C.M Szymanski, C.L Stallings, M Segura, M.F Feldman. A platform for glycoengineering a polyvalent pneumococcal bioconjugate vaccine using E. coli as a host. Nat Commun. (2019) Feb 21;10(1):891.
40. J.A Cain, A.L Dale, P. Niewold, W.P Klare, L Man, M.Y White, N.E Scott, S.J Cordwell. Proteomics reveals multiple phenotypes associated with N-linked glycosylation in Campylobacter jejuni. Mol Cell Proteomics. (2019). 18(4):715-734
41. S.L Vogt, R Scholz, Y Peng, R.L Guest, N.E Scott, S.E Woodward, L.J Foster, T.L Raivio, B.B Finlay. Characterization of the Citrobacter rodentium Cpx regulon and its role in host infection. Mol Microbiol. (2019) 111(3):700-716.
42. S. Khurana, M.J. Coffey, A. John, A.D. Uboldi, M.H. Huynh, R.J. Stewart, V.B Carruthers, C. Tonkin, E.D Goddard-Borger, N.E Scott#. Protein O-fucosyltransferase 2–mediated O-glycosylation of the adhesin MIC2 is dispensable for Toxoplasma gondii tachyzoite infection. J Biol Chem (2019) 1;294(5):1541-1553. # corresponding authorship
36. N.E. Scott. Expanding our understanding of the role of microbial glycoproteomes through high-throughput mass spectrometry approaches. Glycoconj J. (2019) Jul 4
37. G Di Venanzio, A. L. Flores-Mireles, J.J. Calix, M.F. Haurat, N.E. Scott, L.D. Palmer, R.F. Potter, M.E. Hibbins, L. Friedman, B. Wang, G. Dantas, E.P. Skaar, S.J. Hultgren, M.F. Feldman. Urinary tract colonization is enhanced by an endogenous plasmid that regulates chromosomal genes in uropathogenic Acinetobacter baumannii. Nat Commun. (2019) 24;10(1):2763.
38. J. Newson*, N.E. Scott*, I.Y.W. Chung, T.W. Fok Lung, C. Giogha, N. Wang, R. Strugnell, N. Brown, M. Cygler, J. Pearson, E. Hartland. Salmonella effectors SseK1 and SseK3 target death domain proteins in the TNF and TRAIL signaling pathways. Mol. Cell Proteomics (2019) 18(6):1138-1156. *Joint lead author
39. C.M Harding, M.A. Nasr MA, N.E. Scott, G. Goyette-Desjardins, H. Nothaft, A.E. Mayer, S.M. Chavez, J.P Huynh, R.L Kinsella, C.M Szymanski, C.L Stallings, M Segura, M.F Feldman. A platform for glycoengineering a polyvalent pneumococcal bioconjugate vaccine using E. coli as a host. Nat Commun. (2019) Feb 21;10(1):891.
40. J.A Cain, A.L Dale, P. Niewold, W.P Klare, L Man, M.Y White, N.E Scott, S.J Cordwell. Proteomics reveals multiple phenotypes associated with N-linked glycosylation in Campylobacter jejuni. Mol Cell Proteomics. (2019). 18(4):715-734
41. S.L Vogt, R Scholz, Y Peng, R.L Guest, N.E Scott, S.E Woodward, L.J Foster, T.L Raivio, B.B Finlay. Characterization of the Citrobacter rodentium Cpx regulon and its role in host infection. Mol Microbiol. (2019) 111(3):700-716.
42. S. Khurana, M.J. Coffey, A. John, A.D. Uboldi, M.H. Huynh, R.J. Stewart, V.B Carruthers, C. Tonkin, E.D Goddard-Borger, N.E Scott#. Protein O-fucosyltransferase 2–mediated O-glycosylation of the adhesin MIC2 is dispensable for Toxoplasma gondii tachyzoite infection. J Biol Chem (2019) 1;294(5):1541-1553. # corresponding authorship
2018
43. E. Valguarnera, N.E. Scott, P. Azimzadeh, M.Feldman . Surface Exposure and Packing of Lipoproteins into Outer Membrane Vesicles Are Coupled Processes in Bacteroides. mSphere (2018) Nov 7;3(6). pii: e00559-18.
44. C. Kerr, U. Dalwadi, N.E Scott, C. Yip, L.J. Foster, E. Jan. Transmission of Cricket paralysis virus via exosome-like vesicles during infection of Drosophila cells. Scientific reports (2018) Nov 26;8(1):17353
45. N.C. McKenzie, N.E. Scott, A. John, J.M. White, E.D. Goddard-Borger. Synthesis and use of 6,6,6-trifluoro-L-fucose to block core-fucosylation in hybridoma cell lines. Carbohydr Res. (2018) May 23; 465:4-9.
44. C. Kerr, U. Dalwadi, N.E Scott, C. Yip, L.J. Foster, E. Jan. Transmission of Cricket paralysis virus via exosome-like vesicles during infection of Drosophila cells. Scientific reports (2018) Nov 26;8(1):17353
45. N.C. McKenzie, N.E. Scott, A. John, J.M. White, E.D. Goddard-Borger. Synthesis and use of 6,6,6-trifluoro-L-fucose to block core-fucosylation in hybridoma cell lines. Carbohydr Res. (2018) May 23; 465:4-9.
Pre-establishment of Scott lab publications
2017
46. R.H Malty, H Aoki, A Kumar, S Phanse, S Amin, Q Zhang, Z Minic, F Goebels, G Musso, Z Wu, H Abou-Tok, M Meyer, V Deineko, S Kassir, V Sidhu, M Jessulat, N.E Scott, X Xiong, J Vlasblom, B Prasad, L.J Foster, T Alberio, B Garavaglia, H Yu, G.D Bader, K Nakamura, J Parkinson, M Babu. A Map of Human Mitochondrial Protein Interactions Linked to Neurodegeneration Reveals New Mechanisms of Redox Homeostasis and NF-κB Signaling. Cell Syst. (2017) Dec 27;5(6):564-577.e12.
47. N.E Scott and E.L Hartland. Post-translational mechanisms of host subversion by bacterial. Trends in Molecular Medicine (2017). Dec;23(12):1088-1102.
48. R.G. Stacey, M.A Skinnider, N.E Scott, L.J. Foster. A rapid and accurate approach for prediction of interactomes from co-elution data (PrInCE). BMC Bioinformatics. (2017) 18(1):457.
49. S. Lopaticki, A.S.P Yang, A John, N.E Scott, J.P Lingford, M.T O'Neill, S.M Erickson, N.C McKenzie, C Jennison, L.W Whitehead, D.N Douglas, N.M Kneteman, E.D Goddard-Borger, J.A Boddey. Protein O-fucosylation in Plasmodium falciparum ensures efficient infection of mosquito and vertebrate hosts. Nat Commun. (2017) 8(1) :561.
50. N.E Scott#, C Giogha, G.L Pollock, C.L Kenned, A.I Webb, N.A Williamson, J.S Pearson, E.L Hartland. The bacterial arginine glycosyltransferase effector NleB preferentially modifies Fas-associated death domain protein (FADD). J Biol Chem. (2017) 292(42):17337-17350. # corresponding authorship
51. N.E Scott, E.L Hartland. The role of mass spectrometry analysis in bacterial effector characterization. Biochem J. (2017) 474(16):2779-2784
52. C.M Harding, M.R Pulido, G Di Venanzio, R.L Kinsella, A.I Webb, N.E Scott, J Pachón, M.F Feldman. Pathogenic Acinetobacter Species have a Functional Type I Secrection System and Contact-Dependent Inhibition Systems. J Biol Chem. (2017 )292(22):9075-9087.
53. J.M McCoy, R.J Stewart, A.D Uboldi, D Li, J Schröder, N.E Scott, A.T Papenfuss, A.M Lehane, L.J Foster, C.J Tonkin. A Forward-gene c Screen Identifies a Negative Regulator of Rapid Ca2+- dependent Cell Egress in the Intracellular Parasite Toxoplasma gondii. J Biol Chem. (2017) 292(18):7662-7674.
54. N.E. Scott, R.D. Rogers, A. Prudova, N.F. Brown, N. Fortelny, C.M. Overall, and L.J. Foster. Interactome disassembly during apoptosis occurs independent of caspase cleavage. Mol Syst Biol (2017). 13(1):906.
55. K. Creuzburg, C. Giogha, T Wong Fok Lung, N.E. Scott, S. Mühlen, E.L. Hartland, J.S. Pearson. The Type III effector NleD from enteropathogenic E. coli differentiates between host substrates p38 and JNK. Infect Immun. (2017). 85(2): e00620-16.
47. N.E Scott and E.L Hartland. Post-translational mechanisms of host subversion by bacterial. Trends in Molecular Medicine (2017). Dec;23(12):1088-1102.
48. R.G. Stacey, M.A Skinnider, N.E Scott, L.J. Foster. A rapid and accurate approach for prediction of interactomes from co-elution data (PrInCE). BMC Bioinformatics. (2017) 18(1):457.
49. S. Lopaticki, A.S.P Yang, A John, N.E Scott, J.P Lingford, M.T O'Neill, S.M Erickson, N.C McKenzie, C Jennison, L.W Whitehead, D.N Douglas, N.M Kneteman, E.D Goddard-Borger, J.A Boddey. Protein O-fucosylation in Plasmodium falciparum ensures efficient infection of mosquito and vertebrate hosts. Nat Commun. (2017) 8(1) :561.
50. N.E Scott#, C Giogha, G.L Pollock, C.L Kenned, A.I Webb, N.A Williamson, J.S Pearson, E.L Hartland. The bacterial arginine glycosyltransferase effector NleB preferentially modifies Fas-associated death domain protein (FADD). J Biol Chem. (2017) 292(42):17337-17350. # corresponding authorship
51. N.E Scott, E.L Hartland. The role of mass spectrometry analysis in bacterial effector characterization. Biochem J. (2017) 474(16):2779-2784
52. C.M Harding, M.R Pulido, G Di Venanzio, R.L Kinsella, A.I Webb, N.E Scott, J Pachón, M.F Feldman. Pathogenic Acinetobacter Species have a Functional Type I Secrection System and Contact-Dependent Inhibition Systems. J Biol Chem. (2017 )292(22):9075-9087.
53. J.M McCoy, R.J Stewart, A.D Uboldi, D Li, J Schröder, N.E Scott, A.T Papenfuss, A.M Lehane, L.J Foster, C.J Tonkin. A Forward-gene c Screen Identifies a Negative Regulator of Rapid Ca2+- dependent Cell Egress in the Intracellular Parasite Toxoplasma gondii. J Biol Chem. (2017) 292(18):7662-7674.
54. N.E. Scott, R.D. Rogers, A. Prudova, N.F. Brown, N. Fortelny, C.M. Overall, and L.J. Foster. Interactome disassembly during apoptosis occurs independent of caspase cleavage. Mol Syst Biol (2017). 13(1):906.
55. K. Creuzburg, C. Giogha, T Wong Fok Lung, N.E. Scott, S. Mühlen, E.L. Hartland, J.S. Pearson. The Type III effector NleD from enteropathogenic E. coli differentiates between host substrates p38 and JNK. Infect Immun. (2017). 85(2): e00620-16.
2016
56. B.S Weber, S.W. Hennon, M.S. Wright, N.E. Scott, V. de Berardinis, L.J. Foster, J.A. Ayala, M.D. Adams, M.F. Feldman. Genetic Dissection of the Type VI Secretion System in Acinetobacter and Identification of a Novel Peptidoglycan Hydrolase, TagX, Required for Its Biogenesis. MBio. (2016) 7(5): e01253-16.
57. M.J. Bround, R. Wambolt, H. Cen, P. Asghari, R.F. Albu, J. Han, D. McAfee, M. Pourrier, N.E. Scott, L. Bohunek, J.E. Kulpa, S.R. Chen, D. Fedida, R.W. Brownsey, C.H. Borchers, L.J. Foster, T. Mayor, E.D. Moore, M.F. Allard, J.D. Johnson. Cardiac Ryanodine Receptor (Ryr2)-mediated Calcium Signals Specifically Promote Glucose Oxidation via Pyruvate Dehydrogenase. J Biol Chem. (2016) 4;291(45):23490-23505.
57. M.J. Bround, R. Wambolt, H. Cen, P. Asghari, R.F. Albu, J. Han, D. McAfee, M. Pourrier, N.E. Scott, L. Bohunek, J.E. Kulpa, S.R. Chen, D. Fedida, R.W. Brownsey, C.H. Borchers, L.J. Foster, T. Mayor, E.D. Moore, M.F. Allard, J.D. Johnson. Cardiac Ryanodine Receptor (Ryr2)-mediated Calcium Signals Specifically Promote Glucose Oxidation via Pyruvate Dehydrogenase. J Biol Chem. (2016) 4;291(45):23490-23505.
2015
58. W. Elhenawy, N. E. Scott, M.L. Tondo, E.G. Orellano, L.J. Foster, M.F. Feldman. Protein O-linked glycosylation in the plant pathogen Ralstonia solanacearum. Glycobiology. (2015) 26(3):301-11.
59. A. Cameron, S. Huynh, N.E. Scott, E. Frirdich, D. Apel, L.J Foster, C.T. Parker, E.C. Gaynor. High-Frequency Variation of Purine Biosynthesis Genes Is a Mechanism of Success in Campylobacter jejuni. MBio. 2015 6: e00612-15.
60. G. Volkers, L. Worrall, D. Kwan, C. Yu, L. Baumann, E. Lameignere, G. Wasney, N.E. Scott, W. Wakarchuk, L.J. Foster, S. Withers, N. Strynadka. Structure of human ST8SiaIII sialyltransferase provides insight into cell surface polysialylation. Nat Struct Mol Biol. (2015) 22: 627-35.
61. R. Scholz, K. Imami, N.E. Scott, W.S. Trimble, L.J. Foster, B.B Finlay. Novel Host Proteins and Signaling Pathways in Enteropathogenic E. coli Pathogenesis Identified by Global Phosphoproteome Analysis. Mol Cell Proteomics. (2015) 14(7):1927-45.
62. C.M. Harding, M.A. Nasr, R.L. Kinsella, N.E. Scott, J.L Foster, B.S. Weber, S.E Fiester, L.A. Actis, E.N. Tracy, R.S. Munson, M.F. Feldman. Acinetobacter strains carry two functional oligosaccharyltransferases, one devoted exclusively to type IV pilin, and the other one dedicated to O-glycosylation of multiple proteins. Mol Microbiol. (2015) 96(5):1023-41.
63. N.E Scott#, L.M Brown, A.R Kristensen, J.L Foster. Development of a computational framework for the analysis of protein correlation profiling and spatial proteomics experiments. J Proteomics. (2015), 118:112-29. # corresponding authorship
59. A. Cameron, S. Huynh, N.E. Scott, E. Frirdich, D. Apel, L.J Foster, C.T. Parker, E.C. Gaynor. High-Frequency Variation of Purine Biosynthesis Genes Is a Mechanism of Success in Campylobacter jejuni. MBio. 2015 6: e00612-15.
60. G. Volkers, L. Worrall, D. Kwan, C. Yu, L. Baumann, E. Lameignere, G. Wasney, N.E. Scott, W. Wakarchuk, L.J. Foster, S. Withers, N. Strynadka. Structure of human ST8SiaIII sialyltransferase provides insight into cell surface polysialylation. Nat Struct Mol Biol. (2015) 22: 627-35.
61. R. Scholz, K. Imami, N.E. Scott, W.S. Trimble, L.J. Foster, B.B Finlay. Novel Host Proteins and Signaling Pathways in Enteropathogenic E. coli Pathogenesis Identified by Global Phosphoproteome Analysis. Mol Cell Proteomics. (2015) 14(7):1927-45.
62. C.M. Harding, M.A. Nasr, R.L. Kinsella, N.E. Scott, J.L Foster, B.S. Weber, S.E Fiester, L.A. Actis, E.N. Tracy, R.S. Munson, M.F. Feldman. Acinetobacter strains carry two functional oligosaccharyltransferases, one devoted exclusively to type IV pilin, and the other one dedicated to O-glycosylation of multiple proteins. Mol Microbiol. (2015) 96(5):1023-41.
63. N.E Scott#, L.M Brown, A.R Kristensen, J.L Foster. Development of a computational framework for the analysis of protein correlation profiling and spatial proteomics experiments. J Proteomics. (2015), 118:112-29. # corresponding authorship
2014
64. R.L Kinsella, N.E Scott, M.F Feldman. Clinical implications of glycoproteomics for Acinetobacter baumannii. Expert Rev Proteomics. (2014), 11: 1-3
65. N.E Scott, N.B Marzook, J.A Cain, N Solis, M Thaysen-Andersen, S.P Djordjevic, N.H Packer, M.R Larsen, S.J Cordwell. Comparative Proteomics and Glycoproteomics Reveal Increased N-Linked Glycosylation and Relaxed Sequon Specificity in Campylobacter jejuni NCTC11168 O. J Proteome Res. (2014), 13(11): 5136-5150.
66. N.E Scott, R.L Kinsella, A.V Edwards, M.R Larsen, S Dutta, J Saba, L.J Foster, M.F Feldman. Diversity within the O-linked protein glycosylation systems of Acinetobacter species. Mol Cell Proteomics. (2014), 13(9): 2354-2370.
67. K.V Lithgow*, N.E Scott*, J.A Iwashkiw, E.L Thomson, L.J Foster, M.F Feldman, J.J Dennis. A general protein O-glycosylation system within the Burkholderia cepacia complex is involved in motility and virulence. Mol Microbiol. (2014), 92(1): 116-137 *Joint lead author
65. N.E Scott, N.B Marzook, J.A Cain, N Solis, M Thaysen-Andersen, S.P Djordjevic, N.H Packer, M.R Larsen, S.J Cordwell. Comparative Proteomics and Glycoproteomics Reveal Increased N-Linked Glycosylation and Relaxed Sequon Specificity in Campylobacter jejuni NCTC11168 O. J Proteome Res. (2014), 13(11): 5136-5150.
66. N.E Scott, R.L Kinsella, A.V Edwards, M.R Larsen, S Dutta, J Saba, L.J Foster, M.F Feldman. Diversity within the O-linked protein glycosylation systems of Acinetobacter species. Mol Cell Proteomics. (2014), 13(9): 2354-2370.
67. K.V Lithgow*, N.E Scott*, J.A Iwashkiw, E.L Thomson, L.J Foster, M.F Feldman, J.J Dennis. A general protein O-glycosylation system within the Burkholderia cepacia complex is involved in motility and virulence. Mol Microbiol. (2014), 92(1): 116-137 *Joint lead author
2013
68. B.L Parker, M Thaysen-Andersen, N Solis, N.E Scott, M.R Larsen, M.E Graham, N.H Packer, S.J Cordwell. Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity. J Proteome Res. (2013), 12(12): 5791-5800.
69. N.E Scott, N.J Hare, M.Y White, J Manos, S.J Cordwell. Secretome of transmissible Pseudomonas aeruginosa AES-1R grown in a cystic fibrosis lung-like environment. J Proteome Res. (2013), 12(12): 5357-5369.
70. R.G Lees-Miller, J.A Iwashkiw, N. E Scott, A Seper, E Vinogradov, S Schild, M.F Feldman. A common pathway for O-linked protein-glycosylation and synthesis of capsule in Acinetobacter baumannii. Mol Microbiol (2013), 89(5): 816-830. Highlighted in the Molecular Microbiology MicroCommentary “Bacteria like sharing their sweets” (2013, 89(5): 811-815).
71. M.A. Musumeci, I Hug, N.E Scott, M.V. Ielmini, L.J. Foster, P.G. Wang, M.F. Feldman. In vitro activity of Neisseria meningitidis PglL O-oligosaccharyltransferase with diverse synthetic lipid donors and a UDP-activated sugar. J. Biol. Chem. (2013). 288(15): 10578-87.
69. N.E Scott, N.J Hare, M.Y White, J Manos, S.J Cordwell. Secretome of transmissible Pseudomonas aeruginosa AES-1R grown in a cystic fibrosis lung-like environment. J Proteome Res. (2013), 12(12): 5357-5369.
70. R.G Lees-Miller, J.A Iwashkiw, N. E Scott, A Seper, E Vinogradov, S Schild, M.F Feldman. A common pathway for O-linked protein-glycosylation and synthesis of capsule in Acinetobacter baumannii. Mol Microbiol (2013), 89(5): 816-830. Highlighted in the Molecular Microbiology MicroCommentary “Bacteria like sharing their sweets” (2013, 89(5): 811-815).
71. M.A. Musumeci, I Hug, N.E Scott, M.V. Ielmini, L.J. Foster, P.G. Wang, M.F. Feldman. In vitro activity of Neisseria meningitidis PglL O-oligosaccharyltransferase with diverse synthetic lipid donors and a UDP-activated sugar. J. Biol. Chem. (2013). 288(15): 10578-87.
2012
72. H. Nothaft, N.E. Scott, E. Vinogradov, X. Liu, R. Hu, B. Beadle, C. Fodor, W.G. Miller, J. Li, S.J. Cordwell, C.M Szymanski. Diversity in the protein N-glycosylation pathways within the Campylobacter genus. Mol. Cell. Proteomics (2012). 11(11): 1203-19.
73. N.E. Scott, H. Nothaft, A.V.G. Edwards, M. Labbate, S.P. Djordjevic, M.R. Larsen, C.M. Szymanski, S.J. Cordwell. Modification of the Campylobacter jejuni N-linked glycan by EptC-mediated addition of phosphoethanolamine. J. Biol. Chem. (2012). 287(35): 29384-96
74. J.A. Iwashkiw, A. Seper, B.S. Weber, N.E. Scott, E. Vinogradov, C. Stratilo, B. Reiz, S.J. Cordwell, R. Whittal, S. Schild, M.F. Feldman. Identification of a General O-linked Protein Glycosylation System in Acinetobacter baumannii and Its Role in Virulence and Biofilm Formation. PLOS pathogens. (2012) 8(6): e1002758. PMID: 22685409. Highlighted in Nature Review Microbiology research highlight (2012, 10: 523).
73. N.E. Scott, H. Nothaft, A.V.G. Edwards, M. Labbate, S.P. Djordjevic, M.R. Larsen, C.M. Szymanski, S.J. Cordwell. Modification of the Campylobacter jejuni N-linked glycan by EptC-mediated addition of phosphoethanolamine. J. Biol. Chem. (2012). 287(35): 29384-96
74. J.A. Iwashkiw, A. Seper, B.S. Weber, N.E. Scott, E. Vinogradov, C. Stratilo, B. Reiz, S.J. Cordwell, R. Whittal, S. Schild, M.F. Feldman. Identification of a General O-linked Protein Glycosylation System in Acinetobacter baumannii and Its Role in Virulence and Biofilm Formation. PLOS pathogens. (2012) 8(6): e1002758. PMID: 22685409. Highlighted in Nature Review Microbiology research highlight (2012, 10: 523).
2011
75. D.R. Bogema, N.E. Scott, M. Padula, J.L. Tacchi, B.B. Raymond, C. Jenkins, S.J. Cordwell, F.C. Minion, M.J. Walker, S.P. Djordjevic. The sequence TTKF | QE defines the site of proteolytic cleavage in Mhp683, a novel glycosaminoglycan and cilium adhesin of Mycoplasma hyopneumoniae. J. Biol. Chem. (2011) 286(48): 41217-29.
76. N.J. Hare*, N.E. Scott*, E.H.H. Shin, A.M. Connolly, M.R. Larsen, G. Palmisano and S.J. Cordwell. Proteomics of the oxida-tive stress response induced by hydrogen peroxide and paraquat reveals a novel AhpC-like Protein in Pseudomonas aeruginosa. Proteomics (2011) 11(15): 3056-69. *Joint lead author.
77. B.L. Parker, G. Palmisano, A.V. Edwards, M.Y. White, K. Engholm-Keller, A. Lee, N.E. Scott, D, Kolarich, B.D. Hambly, N.H. Packer, M.R. Larsen and S.J. Cordwell. Quantitative N-linked glycoproteomics of myocardial ischemia / reperfusion injury reveals early remodeling in the extracellular environment. Mol. Cell. Proteomics (2011). 10(8): M110.006833.
78. N.E. Scott, B.L. Parker, A.M. Connolly, J. Paulech, A.V. Edwards, B. Crossett, L. Falconer, D. Kolarich, S.P. Djordjevic, P. HØjrup, N.H. Packer, M.R. Larsen and S.J. Cordwell. Simultaneous glycan-peptide characterization using hydrophilic interaction chromatography and parallel fragmentation by CID, HCD and ETD-MS applied to the N-linked glycoproteome of Campylobacter jejuni. Mol. Cell. Proteomics (2011) 10(2): M000031-MCP201.
76. N.J. Hare*, N.E. Scott*, E.H.H. Shin, A.M. Connolly, M.R. Larsen, G. Palmisano and S.J. Cordwell. Proteomics of the oxida-tive stress response induced by hydrogen peroxide and paraquat reveals a novel AhpC-like Protein in Pseudomonas aeruginosa. Proteomics (2011) 11(15): 3056-69. *Joint lead author.
77. B.L. Parker, G. Palmisano, A.V. Edwards, M.Y. White, K. Engholm-Keller, A. Lee, N.E. Scott, D, Kolarich, B.D. Hambly, N.H. Packer, M.R. Larsen and S.J. Cordwell. Quantitative N-linked glycoproteomics of myocardial ischemia / reperfusion injury reveals early remodeling in the extracellular environment. Mol. Cell. Proteomics (2011). 10(8): M110.006833.
78. N.E. Scott, B.L. Parker, A.M. Connolly, J. Paulech, A.V. Edwards, B. Crossett, L. Falconer, D. Kolarich, S.P. Djordjevic, P. HØjrup, N.H. Packer, M.R. Larsen and S.J. Cordwell. Simultaneous glycan-peptide characterization using hydrophilic interaction chromatography and parallel fragmentation by CID, HCD and ETD-MS applied to the N-linked glycoproteome of Campylobacter jejuni. Mol. Cell. Proteomics (2011) 10(2): M000031-MCP201.
2010
79. N.E. Scott, A. Deutscher, L. Falconer, S.P. Djordjevic and S.J. Cordwell. Mass spectrometric characterization of the Campylobacter jejuni adherence factor CadF reveals post-translational processing that removes immunogenicity while retaining fibronectin binding. Proteomics (2010) 10(2): 277-288.
2009
80. N.E. Scott, D. Bogema, A. Connolly, L. Falconer, S.P. Djordjevic and S.J. Cordwell. Mass spectrometric characterization of the surface-associated 42 kDa lipoprotein JlpA as a glycosylated antigen in strains of Campylobacter jejuni. J Proteome Res. (2009) 8(10): 4654-4664.
81. N.E. Scott and S.J. Cordwell. Campylobacter proteomics: guidelines, challenges and future perspectives. Expert Revs. Prote-omics (2009) 6(1): 61-74.
81. N.E. Scott and S.J. Cordwell. Campylobacter proteomics: guidelines, challenges and future perspectives. Expert Revs. Prote-omics (2009) 6(1): 61-74.
2008
82. S.J. Cordwell, A.C.L. Len, R.G. Touma, N.E. Scott, L. Falconer, D. Jones, A. Connolly, B. Crossett and S.P. Djordjevic. Identi-fication of surface-associated proteins from Campylobacter jejuni using complementary proteomics technologies. Proteomics (2008) 8(1): 122-39.
